Confluence Mobile - Integrated Genome Browser Help Pages
Confluence Mobile - Integrated Genome Browser Help Pages
Challenges and importance of mid-sized deletion identification for genomic medicine - SeqOne Genomics
IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis | Scientific Reports
Frontiers | MATCHCLIP: locate precise breakpoints for copy number variation using CIGAR string by matching soft clipped reads
How do I detect deletions?
Feature request: sort by start position (when showing soft-clipped bases) · Issue #725 · igvteam/igv · GitHub
ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping information | BMC Bioinformatics | Full Text
Soft-clipped reads vs. improperly aligned reads at a structural variant... | Download Scientific Diagram
BAMClipper: removing primers from alignments to minimize false-negative mutations in amplicon next-generation sequencing | Scientific Reports
Sensitive detection of circular DNAs at single-nucleotide resolution using guided realignment of partially aligned reads | bioRxiv
Manipulating NGS data with Galaxy - Galaxy Community Hub
Frontiers | SIns: A Novel Insertion Detection Approach Based on Soft-Clipped Reads
QC Fail Sequencing » Soft-clipping of reads may add potentially unwanted alignments to repetitive regions
Reads filtering · Issue #879 · igvteam/igv.js · GitHub
Inability of Viewing Only Soft-clipped Reads · Issue #852 · igvteam/igv · GitHub
Figure 1 from BreaKmer: detection of structural variation in targeted massively parallel sequencing data using kmers | Semantic Scholar
Confluence Mobile - Integrated Genome Browser Help Pages
Adam Taranto on Twitter: "@aeharkess @nanopore @PacBio Teloclip is able to recover long-read alignments which are soft-clipped at contig ends and optionally filter for the presence of telomeric repeat motifs in the
QC Fail Sequencing » Soft-clipping of reads may add potentially unwanted alignments to repetitive regions
Soft-clipped reads vs. improperly aligned reads at a structural variant... | Download Scientific Diagram
Split Reads
ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping information | BMC Bioinformatics | Full Text
Virus-Clip: a fast and memory-efficient viral integration site detection tool at single-base resolution with annotation capability | Oncotarget
Soft clipped reads (SCR) support novel arrangements and longer than... | Download Scientific Diagram
![PDF] Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/16b34a01c549bc1b12b6c5a17e85e1db117f26e3/2-Figure1-1.png "PDF] Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads | Semantic Scholar")
PDF] Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads | Semantic Scholar
